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Cutadapt

  • Description

    finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

  • Usage

    To list all executables provided by Cutadapt, run: $ biogrids-list cutadapt Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install cutadapt Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    M. Martin. 2011. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet.journal. 17(1): 10-12.


    • *Full citation information available through

  • Keywords

    Read Quality Control

  • Default Versions

    Linux 64:  4.9 (169.0 MB)
    OS X INTEL:  4.9 (95.2 MB)

  • Other Versions

      Linux 64:

      1.14 (2.9 KB) , 1.18 (188.1 MB) , 2.3 (2.9 KB) , 4.1 (242.6 MB) , 4.4 (152.8 MB) , 4.8 (167.8 MB)

    • OS X INTEL:

      1.14 (2.8 KB) , 1.18 (116.8 MB) , 2.0 (2.2 KB) , 2.3 (2.8 KB) , 4.1 (177.9 MB) , 4.4 (102.3 MB) , 4.8 (828.1 MB)

  • Developers

    Marcel Martin

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