Supported Applications
Cromwell
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Description
a Workflow Management System geared towards scientific workflows.
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Usage Notes
In the BioGrids environment cromwell can be run with the alias "cromwell" instead of typing the full java invocation:
java -jar cromwell-29.jar run myWorkflow.wdl
is replaced by
cromwell run myWorkflow.wdl
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install cromwell
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Primary Citation*
K. Voss, J. Gentry, and G. V. der Auwera. 2017. Full-stack genomics pipelining with GATK4 + WDL + Cromwell. f1000research.
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*Full citation information available through
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Default Versions
Linux 64:  35
OS X INTEL:  35