Supported Applications

CNVkit

  • Description

    a command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from high-throughput sequencing.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids install cnvkit Copy to clipboard
  • Primary Citation*

    E. Talevich, A. H. Shain, T. Botton, and B. BC.. 2016. CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing. PLoS Comput Biol. 12(4).


    • *Full citation information available through

  • Keywords

    Genomics

  • Default Versions

    Linux 64:  0.9.7
    OS X INTEL:  0.9.7

  • Other Versions

      Linux 64:

      0.9.6
    • OS X INTEL:

      0.9.6
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