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BreakDancer

  • Description

    a Perl/Cpp package that provides genome-wide detection of structural variants from next generation paired-end sequencing reads. It includes two complementary programs.

  • Usage

    To list all executables provided by BreakDancer, run: $ biogrids-list breakdancer Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install breakdancer Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    K. Chen, J. W. Wallis, M. D. McLellan, D. E. Larson, J. M. Kalicki, C. S. Pohl, S. D. McGrath, M. C. Wendl, Q. Zhang, D. P. Locke, X. Shi, R. S. Fulton, T. J. Ley, R. K. Wilson, L. Ding, and E. R. Mardis. 2009. BreakDancer: an algorithm for high-resolution mapping of genomic structural variation. Nature Methods. 6(9): 677-681.


    • *Full citation information available through

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