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Supported Applications

BLASR

  • Description

    (Basic Local Alignment with Successive Refinement) maps Single Molecule Sequencing (SMS) reads that are thousands of bases long, with divergence between the read and genome dominated by insertion and deletion error.

  • Usage

    To list all executables provided by BLASR, run: $ biogrids-list blasr Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install blasr Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    M. J. Chaisson and T. G.. 2012. Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory. BMC Bioinformatics. 13(238).


    • *Full citation information available through

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