Supported Applications


  • Description

    a set of tools for the time-efficient analysis of Bisulfite-Seq (BS-Seq) data. Bismark performs alignments of bisulfite-treated reads to a reference genome and cytosine methylation calls at the same time.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install bismark Copy to clipboard
  • Primary Citation*

    F. Krueger and S. R. Andrews. 2011. Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications. Bioinformatics. 27(11): 1571-1572.

    • *Full citation information available through

  • Default Versions

    Linux 64:  0.20.0
    OS X INTEL:  0.20.0