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Supported Applications

BETA

  • Description

    (Binding and Expression Target Analysis) a software package that integrates ChIP-seq of transcription factors or chromatin regulators with differential gene expression data to infer direct target genes.

  • Usage

    To list all executables provided by BETA, run: $ biogrids-list beta Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install beta Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    S. Wang, H. Sun, J. Ma, C. Zang, C. Wang, J. Wang, Q. Tang, C. A. Meyer, and Y. Z. X. S. Liu. 2013. Target analysis by integration of transcriptome and ChIP-seq data with BETA. Nature Protocols. Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.. 8(12): 2502-2515.


    • *Full citation information available through

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