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BAMscale

  • Description

    BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.

  • Usage

    To list all executables provided by BAMscale, run: $ biogrids-list bamscale Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install bamscale Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    L. S. Pongor, J. M. Gross, R. V. Alvarez, J. Murai, S.-M. Jang, H. Zhang, C. Redon, H. Fu, S.-Y. Huang, B. Thakur, A. Baris, L. Marino-Ramirez, D. Landsman, M. I. Aladjem, and Y. Pommier. 2019. BAMscale: quantification of DNA sequencing peaks and generation of scaled coverage tracks. biorxiv.


    • *Full citation information available through

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