Supported Applications

ARIBA

  • Description

    (Antibiotic Resistance Identification By Assembly) a tool that identifies antibiotic resistance genes by running local assemblies. It can also be used for MLST calling.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install ariba Copy to clipboard
  • Primary Citation*

    M. Hunt, A. E. Mather, L. Sánchez-Busó, A. J. Page, J. Parkhill, J. A. Keane, and S. R. Harris. 2017. ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads. Microbial genomics. 3(10): e000131.


    • *Full citation information available through

Scroll