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Supported Applications

arcs

  • Description

    Scaffolding genome sequence assemblies using linked or long reads.

  • Usage

    To list all executables provided by arcs, run: $ biogrids-list arcs Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install arcs Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    L. Coombe, J. Zhang, B. P. Vandervalk, J. Chu, S. D. Jackman, Birol I, and R. L. Warren. 2018. ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers. BMC bioinformatics. 19(1): 234.


    • *Full citation information available through

  • Keywords

    Genome Assembly

  • Default Versions

    Linux 64:  1.2.4 (18.0 MB)
    OS X INTEL:  1.2.4 (9.4 MB)

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