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AnchorWave

  • Description

    AnchorWave (Anchored Wavefront Alignment) identifies collinear regions via conserved anchors (full-length CDS and full-length exon have been implemented currently) and breaks collinear regions into shorter fragments, i.e., anchor and inter-anchor intervals.

  • Usage

    To list all executables provided by AnchorWave, run: $ biogrids-list anchorwave Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install anchorwave Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    B. Song, S. Marco-Sola, M. Moreto, L. Johnson, E. S. Buckler, and M. C. Stitzer. 2022. AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication. Proceedings of the National Academy of Sciences of the United States of America. 119(1).


    • *Full citation information available through

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