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Supported Applications


  • Description

    AMPtk: Amplicon tool kit for processing high throughput amplicon sequencing data.

  • Usage

    To list all executables provided by AMPtk, run: $ biogrids-list amptk Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install amptk Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Primary Citation*

    J. M. Palmer, M. A. Jusino, M. T. Banik, and D. L. Lindner. 2018. Non-biological synthetic spike-in controls and the AMPtk software pipeline improve mycobiome data. PeerJ. 6: e4925.

    • *Full citation information available through