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Supported Applications

AGAT

  • Description

    (Another Gff Analysis Toolkit) a suite of tools to handle gene annotations in any GTF/GFF format.

  • Usage

    To list all executables provided by AGAT, run: $ biogrids-list agat Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install agat Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    J. Dainat. 2021. AGAT: Another Gff Analysis Toolkit to handle annotations in any GTF/GFF format. (Version v0.4.0). Zenodo. https://www.doi.org/10.5281/zenodo.3552717.
    (Note: Adapt the version for the one you have used.)


    • *Full citation information available through

  • Keywords

    High-throughput sequencing

  • Default Versions

    Linux 64:  1.2.0 (942.5 MB)
    OS X INTEL:  1.2.0 (933.6 MB)

  • Other Versions

      Linux 64:

      0.6.2 (948.6 MB)

    • OS X INTEL:

      0.6.2 (848.9 MB)
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