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TakeABreak

  • Description

    tool that can detect inversion breakpoints directly from raw NGS reads, without the need of any reference genome and without de novo assembling the genomes

  • Usage

    To list all executables provided by TakeABreak, run: $ biogrids-list takeabreak Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install takeabreak Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Citation Note

    Please cite:


    Claire Lemaitre, Liviu Ciortuz and Pierre Peterlongo. Mapping-free and Assembly-free Discovery of Inversion Breakpoints from Raw NGS Reads. Proceedings of AlCoB 2014, in Algorithms for Computational Biology, LNCS vol. 8542, pp. 119–130.

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