Search
Button for mobile navigation
Join us

Supported Applications

SAIGE

  • Description

    SAIGE is an R package developed with Rcpp for genome-wide association tests in large-scale data sets and biobanks.

  • Usage

    To list all executables provided by SAIGE, run: $ biogrids-list saige Copy to clipboard

  • Usage Notes

    BioGrids curated SAIGE provides the callable programs:

    R.saige

    Rscript.saige

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install saige Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    W. Zhou, J. B. Nielsen, L. G. Fritsche, R. Dey, M. E. Gabrielsen, B. N. Wolford, J. LeFaive, P. VandeHaar, S. A. Gagliano, A. Gifford, L. A. Bastarache, W. Q. Wei, J. C. Denny, M. Lin, K. Hveem, H. M. Kang, G. R. Abecasis, C. J. Willer, and S. Lee. 2018. Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies. Nature genetics. 50(9): 1335-1341.


    • *Full citation information available through

Scroll