Supported Applications
regtools
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Description
is a set of tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context.
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Usage
To list all executables provided by regtools, run:$ biogrids-list regtools -
Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install regtoolsAvailable operating systems: Linux 64, OS X INTEL -
Primary Citation*
Y.-Y. Feng, A. Ramu, K. C. Cotto, Z. L. Skidmore, J. Kunisaki, D. F. Conrad, Y. Lin, W. C. Chapman, R. Uppaluri, R. Govindan, O. L. Griffith, and M. Griffith. 2018. RegTools: Integrated analysis of genomic and transcriptomic data for discovery of splicing variants in cancer. bioRxiv.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64: 1.0.0 (31.7 MB)
OS X INTEL: 1.0.0 (2.3 MB) -
Other Versions
Linux 64:
0.5.1 (16.5 MB) -
OS X INTEL:
0.5.1 (1.1 MB)