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GSEApy

  • Description

    a Python/Rust implementation for GSEA and wrapper for Enrichr. GSEApy can be used for RNA-seq, ChIP-seq, Microarray data. It can be used for convenient GO enrichment and to produce publication quality figures in python.

  • Usage

    To list all executables provided by GSEApy, run: $ biogrids-list gseapy Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install gseapy Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    Z. Fang, X. Liu, and G. Peltz. 2023. GSEApy: a comprehensive package for performing gene set enrichment analysis in Python. Bioinformatics (Oxford, England). 39(1).


    • *Full citation information available through

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