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Supported Applications

bamtools

  • Description

    a fast, flexible C++ API & toolkit for reading, writing, and manipulating BAM files.

  • Usage

    To list all executables provided by bamtools, run: $ biogrids-list bamtools Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install bamtools Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    D. W. Barnett, E. K. Garrison, A. R. Quinlan, M. P. Strömberg, and G. T. Marth. 2011. BamTools: a C++ API and toolkit for analyzing and managing BAM files. Bioinformatics. Oxford Journals. 27(12): 1691-1692.


    • *Full citation information available through

  • Keywords

    ChIP-Sequencing, High-throughput sequencing, WGS Analysis

  • Default Versions

    Linux 64:  2.5.2 (14.6 MB)
    OS X INTEL:  2.5.2 (1.3 MB)

  • Other Versions

      Linux 64:

      2.3.0 (4.5 MB) , 2.4.0 (4.3 MB) , 2.5.0 (1.5 MB) , 2.5.1 (15.0 MB)

    • OS X INTEL:

      2.4.0 (4.2 MB) , 2.5.0 (1.5 MB) , 2.5.1 (2.2 MB)

  • Developers

    Derek Barnett, Erik Garrison, Gabor T Marth

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