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antiSMASH

  • Description

    antiSMASH (antibiotics and Secondary Metabolite Analysis SHell) allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genomes. It integrates and cross-links with a large number of in silico secondary metabolite analysis tools that have been published earlier.

  • Usage

    To list all executables provided by antiSMASH, run: $ biogrids-list antismash Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install antismash Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    K. Blin, S. Shaw, H. E. Augustijn, Z. L. Reitz, F. Biermann, M. Alanjary, A. Fetter, B. R. Terlouw, W. W. Metcalf, E. J. N. Helfrich, G. P. van Wezel, M. H. Medema, and T. Weber. 2023. antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation. Nucleic acids research. 51: W46-W50.


    • *Full citation information available through

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