Supported Applications


  • Description

    (Linked Read Analysis) a computational tool for removing amplification artifacts from single-cell DNA sequencing data and estimating mutation rates in single cells.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install lira Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Primary Citation*

    C. L. Bohrson, A. R. Barton, M. A. Lodato, R. E. Rodin, L. J. Luquette, V. V. Viswanadham, D. C. Gulhan, I. Cortés-Ciriano, M. A. Sherman, M. Kwon, M. E. Coulter, A. Galor, C. A. Walsh, and P. J. Park. 2019. Linked-read analysis identifies mutations in single-cell DNA-sequencing data. Nat Genet. 51(4): 749-754.

    • *Full citation information available through

  • Keywords

    scRNA-Seq Analysis

  • Default Versions

    Linux 64:  1f4cab4 (1.3 GB)
    OS X INTEL:  1f4cab4 (703.8 MB)