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HMCan

  • Description

    a tool specially designed to analyze histone modification ChIP-seq data produced from cancer genomes. HMCan corrects for the GC-content and copy number bias and then applies Hidden Markov Models to detect the signal from the corrected data. On simulated data, HMCan outperformed several commonly used tools developed to analyze histone modification data produced from genomes without copy number alterations.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install hmcan Copy to clipboard Available operating systems: Linux 64, OS X INTEL
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