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GimmeMotifs

  • Description

    a suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments.

  • Usage

    To list all executables provided by GimmeMotifs, run: $ biogrids-list gimmemotifs Copy to clipboard

  • Usage Notes

    GimmeMotifs provides the following executables within BioGrids:

    gimme

    python.gimme

    Example:

    source /programs/biogrids.shrc

    gimme --version

    python.gimme -c 'import gimmemotifs'

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install gimmemotifs Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Citation Note

    Please cite the preprint:

    https://www.biorxiv.org/content/10.1101/474403v1

  • Keywords

    ChIP-Sequencing

  • Default Versions

    Linux 64:  0.16.0 (2.7 GB)
    OS X INTEL:  0.16.0 (1.6 GB)

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