Supported Applications


  • Description

    (Feature frequency profile) an alignment free comparison tool for phylogenetic analysis and text comparison. It can be applied to nucleotide sequences, complete genomes, proteomes and even used for text comparison.

  • Primary Citation*

    G. E. Sims, S.-R. Jun, G. A. Wu, and S.-H. Kim. 2009. Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions. Proc Natl Acad Sci U S A. 106(8): 2677-2682.

    • *Full citation information available through