Supported Applications

biobambam2

Description

tools for early stage NGS alignment file processing including fast sorting and duplicate marking.
Usage
To list all executables provided by biobambam2, run: $ biogrids-list biobambam2
Installation
Use the following command to install this title with the CLI client: $ biogrids-cli install biobambam2 Available operating systems: Linux 64, OS X INTEL
Primary Citation*

G. Tischler and S. Leonard. 2014. biobambam: tools for read pair collation based algorithms on BAM files. Source Code for Biology and Medicine. 9: 13.
- *Full citation information available through
Citation Note

Please cite the following url: http://www.sanger.ac.uk/science/tools/biobambam

Keywords

High-throughput sequencing
Default Versions

Linux 64: 2.0.183 (376.0 MB)
OS X INTEL: 2.0.72 (75.3 MB)
Other Versions
- OS X INTEL:
Developers

Andrew Whitwham, David K Jackson, German Tischler