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Supported Applications

ARIBA

  • Description

    (Antibiotic Resistance Identification By Assembly) a tool that identifies antibiotic resistance genes by running local assemblies. It can also be used for MLST calling.

  • Usage

    To list all executables provided by ARIBA, run: $ biogrids-list ariba Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install ariba Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    M. Hunt, A. E. Mather, L. Sánchez-Busó, A. J. Page, J. Parkhill, J. A. Keane, and S. R. Harris. 2017. ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads. Microbial genomics. 3(10): e000131.


    • *Full citation information available through

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