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WhatsHap

  • Description

    a software for phasing genomic variants using DNA sequencing reads, also called read-based phasing or haplotype assembly.

  • Usage

    To list all executables provided by WhatsHap, run: $ biogrids-list whatshap Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install whatshap Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    M. Patterson, T. Marschall, N. Pisanti, L. van Iersel, L. Stougie, G. W. Klau, and A. Schönhuth. 2015. WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads. Journal of computational biology : a journal of computational molecular cell biology. 22(6): 498-509.


    • *Full citation information available through

  • Keywords

    Genomics

  • Default Versions

    Linux 64:  2.0 (375.4 MB)
    OS X INTEL:  2.0 (352.7 MB)

  • Other Versions

      Linux 64:

      1.1 (423.0 MB)

    • OS X INTEL:

      1.1 (370.1 MB)
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