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Supported Applications

SKESA

  • Description

    (Strategic Kmer Extension for Scrupulous Assemblies) a de-novo sequence read assembler for microbial genomes.

  • Usage

    To list all executables provided by SKESA, run: $ biogrids-list skesa Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install skesa Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Primary Citation*

    A. Souvorov, R. Agarwala, and D. J. Lipman. 2018. SKESA: strategic k-mer extension for scrupulous assemblies. Genome biology. 19(1): 153.


    • *Full citation information available through

  • Keywords

    Genome Assembly

  • Default Versions

    Linux 64:  2.4.0 (15.4 MB)
    OS X INTEL:  2.4.0 (38.6 MB)

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